Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.31□□□□□ -0.44
CD40P25942 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CD40P25942 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 USP17L6P-201ENST00000382470 1197 ntBASIC12.31□□□□□ -0.44
CD40P25942 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CD40P25942 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 AC098935.1-201ENST00000446057 611 ntBASIC12.31□□□□□ -0.44
CD40P25942 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CD40P25942 AC130709.1-201ENST00000484779 1212 ntBASIC12.31□□□□□ -0.44
CD40P25942 RPL18AP8-201ENST00000486071 528 ntBASIC12.31□□□□□ -0.44
CD40P25942 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.31□□□□□ -0.44
CD40P25942 RN7SL81P-201ENST00000493781 261 ntBASIC12.31□□□□□ -0.44
CD40P25942 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.31□□□□□ -0.44
CD40P25942 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.31□□□□□ -0.44
CD40P25942 LINC01922-201ENST00000562582 719 ntBASIC12.31□□□□□ -0.44
CD40P25942 MIR4722-201ENST00000578292 60 ntBASIC12.31□□□□□ -0.44
CD40P25942 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 SPCS2P2-201ENST00000603270 608 ntBASIC12.31□□□□□ -0.44
CD40P25942 AC073352.2-201ENST00000609385 439 ntBASIC12.31□□□□□ -0.44
CD40P25942 AC087392.5-201ENST00000612517 489 ntBASIC12.31□□□□□ -0.44
CD40P25942 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.31□□□□□ -0.44
CD40P25942 COX6A1P2-201ENST00000620597 330 ntBASIC12.31□□□□□ -0.44
CD40P25942 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 HSPA8P5-201ENST00000456928 2069 ntBASIC12.31□□□□□ -0.44
CD40P25942 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 TEKT4P2-202ENST00000559466 1312 ntBASIC12.31□□□□□ -0.44
CD40P25942 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CD40P25942 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 AC126335.2-201ENST00000623362 4637 ntBASIC12.3□□□□□ -0.44
CD40P25942 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 AC099063.4-201ENST00000641099 1602 ntBASIC12.3□□□□□ -0.44
CD40P25942 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 AC012617.1-204ENST00000586340 2305 ntBASIC12.3□□□□□ -0.44
CD40P25942 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 AC078991.1-201ENST00000437297 610 ntBASIC12.3□□□□□ -0.44
CD40P25942 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 MPRIPP1-201ENST00000452433 1089 ntBASIC12.3□□□□□ -0.44
CD40P25942 RN7SL181P-201ENST00000462921 277 ntBASIC12.3□□□□□ -0.44
CD40P25942 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.3□□□□□ -0.44
CD40P25942 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.3□□□□□ -0.44
CD40P25942 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.3□□□□□ -0.44
CD40P25942 MIR3147-201ENST00000577811 66 ntBASIC12.3□□□□□ -0.44
CD40P25942 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.3□□□□□ -0.44
CD40P25942 AC242376.2-201ENST00000619355 883 ntBASIC12.3□□□□□ -0.44
CD40P25942 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.3□□□□□ -0.44
CD40P25942 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD40P25942 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.3□□□□□ -0.44
CD40P25942 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms