Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.85□□□□□ -0.35
HLA-DOBP13765 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HLA-DOBP13765 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.84□□□□□ -0.35
HLA-DOBP13765 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 POM121L10P-201ENST00000436994 1285 ntBASIC12.84□□□□□ -0.35
HLA-DOBP13765 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AL359881.2-201ENST00000602973 570 ntBASIC12.84□□□□□ -0.35
HLA-DOBP13765 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 BAP1-211ENST00000615113 489 ntBASIC12.84□□□□□ -0.35
HLA-DOBP13765 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AC068587.8-201ENST00000641239 219 ntBASIC12.84□□□□□ -0.35
HLA-DOBP13765 AC004923.1-202ENST00000642106 209 ntBASIC12.84□□□□□ -0.35
HLA-DOBP13765 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HLA-DOBP13765 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HLA-DOBP13765 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.83□□□□□ -0.35
HLA-DOBP13765 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HLA-DOBP13765 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.83□□□□□ -0.35
HLA-DOBP13765 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 XBP1P1-201ENST00000436573 652 ntBASIC12.83□□□□□ -0.36
HLA-DOBP13765 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 FAM8A2P-201ENST00000528813 1142 ntBASIC12.83□□□□□ -0.36
HLA-DOBP13765 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms