Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 KRT8P31-201ENST00000504812 1408 ntBASIC11.23□□□□□ -0.61
CD28P10747 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 AP002353.1-201ENST00000528257 1599 ntBASIC11.23□□□□□ -0.61
CD28P10747 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CD28P10747 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
CD28P10747 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CD28P10747 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC11.22□□□□□ -0.61
CD28P10747 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CD28P10747 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.22□□□□□ -0.61
CD28P10747 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.22□□□□□ -0.61
CD28P10747 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.22□□□□□ -0.61
CD28P10747 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.22□□□□□ -0.61
CD28P10747 FTH1P22-201ENST00000456305 520 ntBASIC11.22□□□□□ -0.61
CD28P10747 CHCHD2P9-201ENST00000461726 456 ntBASIC11.22□□□□□ -0.61
CD28P10747 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CD28P10747 NDUFS6P1-201ENST00000485187 316 ntBASIC11.22□□□□□ -0.61
CD28P10747 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC11.22□□□□□ -0.61
CD28P10747 AC114947.1-202ENST00000514136 344 ntBASIC11.22□□□□□ -0.61
CD28P10747 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC11.22□□□□□ -0.61
CD28P10747 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.22□□□□□ -0.61
CD28P10747 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC11.22□□□□□ -0.61
CD28P10747 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC11.22□□□□□ -0.61
CD28P10747 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.22□□□□□ -0.61
CD28P10747 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC11.22□□□□□ -0.61
CD28P10747 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC11.22□□□□□ -0.61
CD28P10747 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC11.22□□□□□ -0.61
CD28P10747 MARK2P16-201ENST00000605714 1723 ntBASIC11.22□□□□□ -0.61
CD28P10747 AC087392.5-201ENST00000612517 489 ntBASIC11.22□□□□□ -0.61
CD28P10747 AL591471.1-201ENST00000621855 229 ntBASIC11.22□□□□□ -0.61
CD28P10747 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CD28P10747 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.22□□□□□ -0.61
CD28P10747 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 AC026748.1-201ENST00000624349 3251 ntBASIC11.22□□□□□ -0.61
CD28P10747 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CD28P10747 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CD28P10747 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CD28P10747 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CD28P10747 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CD28P10747 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.21□□□□□ -0.61
CD28P10747 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms