Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.39□□□□□ -0.11
APOA4P06727 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.39□□□□□ -0.11
APOA4P06727 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.39□□□□□ -0.11
APOA4P06727 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.39□□□□□ -0.11
APOA4P06727 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA4P06727 BAP1-211ENST00000615113 489 ntBASIC14.39□□□□□ -0.11
APOA4P06727 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.39□□□□□ -0.11
APOA4P06727 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOA4P06727 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOA4P06727 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOA4P06727 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA4P06727 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA4P06727 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA4P06727 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 PCDHA5-203ENST00000614258 4248 ntBASIC14.38□□□□□ -0.11
APOA4P06727 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
APOA4P06727 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 BTBD6P1-201ENST00000412176 1267 ntBASIC14.38□□□□□ -0.11
APOA4P06727 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.38□□□□□ -0.11
APOA4P06727 AL354877.1-201ENST00000424412 413 ntBASIC14.38□□□□□ -0.11
APOA4P06727 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.38□□□□□ -0.11
APOA4P06727 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.38□□□□□ -0.11
APOA4P06727 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.38□□□□□ -0.11
APOA4P06727 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.38□□□□□ -0.11
APOA4P06727 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
APOA4P06727 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 AC009955.4-201ENST00000597192 544 ntBASIC14.38□□□□□ -0.11
APOA4P06727 AC009884.2-201ENST00000603110 324 ntBASIC14.38□□□□□ -0.11
APOA4P06727 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.38□□□□□ -0.11
APOA4P06727 MIR6720-201ENST00000611664 98 ntBASIC14.38□□□□□ -0.11
APOA4P06727 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
APOA4P06727 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APOA4P06727 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOA4P06727 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA4P06727 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.37□□□□□ -0.11
APOA4P06727 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
APOA4P06727 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.37□□□□□ -0.11
APOA4P06727 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APOA4P06727 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.37□□□□□ -0.11
APOA4P06727 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
APOA4P06727 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOA4P06727 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA4P06727 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.37□□□□□ -0.11
APOA4P06727 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.37□□□□□ -0.11
APOA4P06727 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.37□□□□□ -0.11
APOA4P06727 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
APOA4P06727 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms