Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC011447.5-201ENST00000616168 564 ntBASIC14.45□□□□□ -0.1
GPC4O75487 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GPC4O75487 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 KRT8P28-201ENST00000433288 1390 ntBASIC14.45□□□□□ -0.1
GPC4O75487 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GPC4O75487 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC4O75487 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GPC4O75487 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
GPC4O75487 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC4O75487 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
GPC4O75487 AC215219.1-201ENST00000400706 1817 ntBASIC14.44□□□□□ -0.1
GPC4O75487 CSPG4P11-201ENST00000560634 4910 ntBASIC14.44□□□□□ -0.1
GPC4O75487 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 MIR326-201ENST00000362220 95 ntBASIC14.44□□□□□ -0.1
GPC4O75487 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.44□□□□□ -0.1
GPC4O75487 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.44□□□□□ -0.1
GPC4O75487 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.44□□□□□ -0.1
GPC4O75487 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 DUX4L46-201ENST00000566845 751 ntBASIC14.44□□□□□ -0.1
GPC4O75487 EEF1DP1-201ENST00000585891 896 ntBASIC14.44□□□□□ -0.1
GPC4O75487 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.44□□□□□ -0.1
GPC4O75487 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC4O75487 AC244157.2-201ENST00000616239 1006 ntBASIC14.44□□□□□ -0.1
GPC4O75487 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC4O75487 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
GPC4O75487 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC4O75487 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC4O75487 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GPC4O75487 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 CICP20-201ENST00000443330 2801 ntBASIC14.43□□□□□ -0.1
GPC4O75487 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC4O75487 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC4O75487 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 CR383656.2-201ENST00000548656 2254 ntBASIC14.43□□□□□ -0.1
GPC4O75487 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC4O75487 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
GPC4O75487 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.43□□□□□ -0.1
GPC4O75487 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GPC4O75487 FAM21FP-201ENST00000426241 1131 ntBASIC14.43□□□□□ -0.1
GPC4O75487 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC4O75487 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms