Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA3F8WFD2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 FAM90A2P-201ENST00000511144 1395 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 FAM90A25P-201ENST00000528404 1395 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 CAP2P1-201ENST00000557743 1390 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 AC005089.1-201ENST00000619486 2241 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 KRT18P36-201ENST00000411618 1276 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 RN7SL258P-201ENST00000478664 300 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 RN7SL67P-201ENST00000492147 296 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 SORD2P-201ENST00000558556 1069 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 MIR4722-201ENST00000578292 60 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 MIR3188-201ENST00000583494 85 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 SPCS2P2-201ENST00000603270 608 ntBASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA3F8WFD2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 AC069218.1-201ENST00000435269 762 ntBASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 PGAM1P5-201ENST00000548011 764 ntBASIC13.06□□□□□ -0.32
NPIPA3F8WFD2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms