Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AC092552.1-201ENST00000547243 906 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AC093726.1-201ENST00000608064 963 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AC099568.2-201ENST00000609194 695 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AC004623.1-201ENST00000624592 2127 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 SLC7A15P-201ENST00000424028 1363 ntBASIC12.29□□□□□ -0.44
TMEM235A6NFC5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM235A6NFC5 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AC136604.1-202ENST00000425471 771 ntBASIC12.28□□□□□ -0.44
TMEM235A6NFC5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AC055876.3-201ENST00000431496 288 ntBASIC12.28□□□□□ -0.44
TMEM235A6NFC5 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AC093004.1-201ENST00000508850 424 ntBASIC12.28□□□□□ -0.44
TMEM235A6NFC5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AC133539.2-201ENST00000604757 467 ntBASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AC138649.4-201ENST00000612222 287 ntBASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 AC009093.10-201ENST00000641956 1442 ntBASIC12.28□□□□□ -0.44
TMEM235A6NFC5 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM235A6NFC5 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms