Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AL157996.1-201ENST00000624684 2299 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AL355334.1-201ENST00000417713 215 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CHCHD2P2-201ENST00000503744 321 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 MIR4649-201ENST00000582839 64 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC103810.10-201ENST00000606504 343 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 LINC02486-201ENST00000604157 3000 ntBASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 AC006372.4-201ENST00000624122 1543 ntBASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 TEKT4P2-202ENST00000559466 1312 ntBASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 SNORA50C-201ENST00000408535 133 ntBASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 RPL18AP8-201ENST00000486071 528 ntBASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 AL031713.1-201ENST00000564813 661 ntBASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 SNORA50.1-201ENST00000628590 135 ntBASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 AC025271.4-201ENST00000621477 1726 ntBASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
KIAA1549Q9HCM3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
KIAA1549Q9HCM3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
KIAA1549Q9HCM3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
KIAA1549Q9HCM3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
KIAA1549Q9HCM3 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.58□□□□□ -0.39
KIAA1549Q9HCM3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.58□□□□□ -0.4
KIAA1549Q9HCM3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms