Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 HSPA7-201ENST00000445535 1927 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 KRT8P6-201ENST00000399259 1207 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 SNRPCP15-201ENST00000424055 192 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AC093700.1-201ENST00000503348 717 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 SRPK2P-201ENST00000523408 1100 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 INO80E-209ENST00000567254 625 ntTSL 2 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 AP003040.1-201ENST00000532044 1024 ntBASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 AC120498.5-201ENST00000561757 299 ntBASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 ABCC6P1-203ENST00000565566 1170 ntBASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 RN7SL134P-201ENST00000579756 303 ntBASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 AL137077.2-201ENST00000635124 1608 ntBASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.06■□□□□ 0.32
TNRC6CQ9HCJ0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 KRT18P33-201ENST00000398525 1043 ntBASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 RNU1-80P-201ENST00000459500 161 ntBASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 RN7SL523P-201ENST00000484401 298 ntBASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 AC008494.1-201ENST00000497612 796 ntBASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.05■□□□□ 0.32
TNRC6CQ9HCJ0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms