Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.79□□□□□ -0.36
VRK1Q99986 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.79□□□□□ -0.36
VRK1Q99986 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VRK1Q99986 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.79□□□□□ -0.36
VRK1Q99986 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.79□□□□□ -0.36
VRK1Q99986 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.79□□□□□ -0.36
VRK1Q99986 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.79□□□□□ -0.36
VRK1Q99986 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.79□□□□□ -0.36
VRK1Q99986 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.79□□□□□ -0.36
VRK1Q99986 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.79□□□□□ -0.36
VRK1Q99986 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.79□□□□□ -0.36
VRK1Q99986 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.79□□□□□ -0.36
VRK1Q99986 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VRK1Q99986 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 AC018442.1-201ENST00000421439 2061 ntBASIC12.79□□□□□ -0.36
VRK1Q99986 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VRK1Q99986 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
VRK1Q99986 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VRK1Q99986 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
VRK1Q99986 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.78□□□□□ -0.36
VRK1Q99986 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.78□□□□□ -0.36
VRK1Q99986 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.78□□□□□ -0.36
VRK1Q99986 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.78□□□□□ -0.36
VRK1Q99986 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.78□□□□□ -0.36
VRK1Q99986 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.78□□□□□ -0.36
VRK1Q99986 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.78□□□□□ -0.36
VRK1Q99986 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.78□□□□□ -0.36
VRK1Q99986 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.78□□□□□ -0.36
VRK1Q99986 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.78□□□□□ -0.36
VRK1Q99986 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.78□□□□□ -0.36
VRK1Q99986 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.78□□□□□ -0.36
VRK1Q99986 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.78□□□□□ -0.36
VRK1Q99986 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.78□□□□□ -0.36
VRK1Q99986 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.78□□□□□ -0.36
VRK1Q99986 AC023090.2-201ENST00000625182 2110 ntBASIC12.78□□□□□ -0.36
VRK1Q99986 AC244452.3-201ENST00000636814 210 ntBASIC12.78□□□□□ -0.36
VRK1Q99986 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
VRK1Q99986 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VRK1Q99986 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VRK1Q99986 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms