Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-CQ95604 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
HLA-CQ95604 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-CQ95604 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HLA-CQ95604 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-CQ95604 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HLA-CQ95604 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HLA-CQ95604 OR7E155P-201ENST00000412208 1014 ntBASIC14.56□□□□□ -0.08
HLA-CQ95604 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-CQ95604 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-CQ95604 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-CQ95604 OR4C14P-201ENST00000440929 923 ntBASIC14.56□□□□□ -0.08
HLA-CQ95604 AF186996.6-201ENST00000485294 149 ntBASIC14.56□□□□□ -0.08
HLA-CQ95604 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-CQ95604 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC14.56□□□□□ -0.08
HLA-CQ95604 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC14.56□□□□□ -0.08
HLA-CQ95604 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-CQ95604 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-CQ95604 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-CQ95604 AC091691.1-201ENST00000583587 1018 ntBASIC14.56□□□□□ -0.08
HLA-CQ95604 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-CQ95604 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-CQ95604 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
HLA-CQ95604 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 RPL4P6-201ENST00000438116 1304 ntBASIC14.56□□□□□ -0.08
HLA-CQ95604 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 AC112693.3-201ENST00000624819 1983 ntBASIC14.56□□□□□ -0.08
HLA-CQ95604 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-CQ95604 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-CQ95604 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-CQ95604 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HLA-CQ95604 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-CQ95604 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-CQ95604 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-CQ95604 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-CQ95604 MIR1307-201ENST00000408840 149 ntBASIC14.55□□□□□ -0.08
HLA-CQ95604 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-CQ95604 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.55□□□□□ -0.08
HLA-CQ95604 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-CQ95604 AC104212.2-201ENST00000478813 628 ntBASIC14.55□□□□□ -0.08
HLA-CQ95604 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-CQ95604 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-CQ95604 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-CQ95604 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-CQ95604 CDC37P2-201ENST00000562287 1029 ntBASIC14.55□□□□□ -0.08
HLA-CQ95604 AC092953.2-201ENST00000608000 699 ntBASIC14.55□□□□□ -0.08
HLA-CQ95604 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 AC008894.3-201ENST00000624324 3103 ntBASIC14.55□□□□□ -0.08
HLA-CQ95604 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms