Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 RN7SKP230-201ENST00000365642 335 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 AC239868.1-201ENST00000369385 493 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 MIR33B-201ENST00000385104 96 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 AC253536.4-201ENST00000440539 267 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 AC019193.1-201ENST00000506678 823 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 INE2-201ENST00000630399 1874 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 SALL4P5-201ENST00000419001 1760 ntBASIC13.59□□□□□ -0.23
TM9SF4Q92544 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 AC078875.1-201ENST00000431907 724 ntBASIC13.59□□□□□ -0.23
TM9SF4Q92544 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 IGLV3-15-201ENST00000518356 244 ntBASIC13.59□□□□□ -0.23
TM9SF4Q92544 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 AC006480.2-201ENST00000609770 1337 ntBASIC13.59□□□□□ -0.23
TM9SF4Q92544 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TM9SF4Q92544 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
TM9SF4Q92544 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms