Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 SERPINA7P1-201ENST00000443077 631 ntBASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 HIST2H2BC-201ENST00000498492 580 ntBASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AC124068.2-201ENST00000569473 1109 ntBASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AC018629.1-201ENST00000623381 1736 ntBASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 AC215219.1-201ENST00000400706 1817 ntBASIC14.96□□□□□ -0.01
TTC39BQ5VTQ0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
TTC39BQ5VTQ0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC064801.2-201ENST00000625052 1303 ntBASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC079781.5-202ENST00000641784 3743 ntBASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 CICP16-201ENST00000502609 2813 ntBASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC39BQ5VTQ0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 AC130686.1-201ENST00000622936 2466 ntBASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TTC39BQ5VTQ0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms