Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AC073869.2-201ENST00000417338 1026 ntBASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 RPL7P35-201ENST00000446943 740 ntBASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AC105137.3-201ENST00000617588 984 ntBASIC17.11■□□□□ 0.33
RFX7Q2KHR2 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX7Q2KHR2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 GUSBP10-201ENST00000417412 665 ntBASIC17.1■□□□□ 0.33
RFX7Q2KHR2 AL355334.1-201ENST00000417713 215 ntBASIC17.1■□□□□ 0.33
RFX7Q2KHR2 PPP1R2P4-201ENST00000424051 595 ntBASIC17.1■□□□□ 0.33
RFX7Q2KHR2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 AP001065.2-201ENST00000617205 644 ntBASIC17.1■□□□□ 0.33
RFX7Q2KHR2 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX7Q2KHR2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms