Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AL445209.1-201ENST00000607269 3491 ntBASIC12.93□□□□□ -0.34
CDK5Q00535 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.93□□□□□ -0.34
CDK5Q00535 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 CCT8L1P-201ENST00000465400 1674 ntBASIC12.93□□□□□ -0.34
CDK5Q00535 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.93□□□□□ -0.34
CDK5Q00535 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.93□□□□□ -0.34
CDK5Q00535 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CDK5Q00535 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.93□□□□□ -0.34
CDK5Q00535 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.93□□□□□ -0.34
CDK5Q00535 AL590640.2-201ENST00000457038 527 ntBASIC12.93□□□□□ -0.34
CDK5Q00535 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.93□□□□□ -0.34
CDK5Q00535 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CDK5Q00535 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.93□□□□□ -0.34
CDK5Q00535 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.93□□□□□ -0.34
CDK5Q00535 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CDK5Q00535 AC010319.3-201ENST00000597028 470 ntBASIC12.93□□□□□ -0.34
CDK5Q00535 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.93□□□□□ -0.34
CDK5Q00535 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.93□□□□□ -0.34
CDK5Q00535 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.93□□□□□ -0.34
CDK5Q00535 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDK5Q00535 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.93□□□□□ -0.34
CDK5Q00535 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.93□□□□□ -0.34
CDK5Q00535 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDK5Q00535 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.93□□□□□ -0.34
CDK5Q00535 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CDK5Q00535 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 AL008718.2-201ENST00000609206 1313 ntBASIC12.92□□□□□ -0.34
CDK5Q00535 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
CDK5Q00535 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.92□□□□□ -0.34
CDK5Q00535 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CDK5Q00535 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CDK5Q00535 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.92□□□□□ -0.34
CDK5Q00535 AL645933.1-201ENST00000440087 609 ntBASIC12.92□□□□□ -0.34
CDK5Q00535 AL355864.2-201ENST00000447420 863 ntBASIC12.92□□□□□ -0.34
CDK5Q00535 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.92□□□□□ -0.34
CDK5Q00535 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 COX5BP1-201ENST00000507622 393 ntBASIC12.92□□□□□ -0.34
CDK5Q00535 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.92□□□□□ -0.34
CDK5Q00535 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.92□□□□□ -0.34
CDK5Q00535 LINC02560-201ENST00000596379 459 ntBASIC12.92□□□□□ -0.34
CDK5Q00535 AC006453.4-201ENST00000636949 1252 ntBASIC12.92□□□□□ -0.34
CDK5Q00535 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 Z98257.2-202ENST00000641138 1548 ntBASIC12.92□□□□□ -0.34
CDK5Q00535 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.92□□□□□ -0.34
CDK5Q00535 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CDK5Q00535 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDK5Q00535 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.92□□□□□ -0.34
CDK5Q00535 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.91□□□□□ -0.34
CDK5Q00535 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDK5Q00535 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDK5Q00535 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms