Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RAE1P78406 DPM3-202ENST00000368399 517 ntBASIC13.54□□□□□ -0.24
RAE1P78406 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RAE1P78406 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 ATP5G2P4-201ENST00000442175 420 ntBASIC13.54□□□□□ -0.24
RAE1P78406 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.54□□□□□ -0.24
RAE1P78406 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 AC009779.1-201ENST00000551138 283 ntBASIC13.54□□□□□ -0.24
RAE1P78406 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.54□□□□□ -0.24
RAE1P78406 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.54□□□□□ -0.24
RAE1P78406 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.54□□□□□ -0.24
RAE1P78406 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.54□□□□□ -0.24
RAE1P78406 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.54□□□□□ -0.24
RAE1P78406 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RAE1P78406 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 SALL4P6-201ENST00000429385 1691 ntBASIC13.53□□□□□ -0.24
RAE1P78406 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.53□□□□□ -0.24
RAE1P78406 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
RAE1P78406 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RAE1P78406 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.53□□□□□ -0.24
RAE1P78406 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.53□□□□□ -0.24
RAE1P78406 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.53□□□□□ -0.24
RAE1P78406 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RAE1P78406 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.53□□□□□ -0.24
RAE1P78406 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.53□□□□□ -0.24
RAE1P78406 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.53□□□□□ -0.24
RAE1P78406 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAE1P78406 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
RAE1P78406 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.53□□□□□ -0.24
RAE1P78406 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.53□□□□□ -0.24
RAE1P78406 RN7SL163P-201ENST00000583100 276 ntBASIC13.53□□□□□ -0.24
RAE1P78406 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.53□□□□□ -0.24
RAE1P78406 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.53□□□□□ -0.24
RAE1P78406 AL157813.1-201ENST00000612996 587 ntBASIC13.53□□□□□ -0.24
RAE1P78406 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.53□□□□□ -0.24
RAE1P78406 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RAE1P78406 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.53□□□□□ -0.24
RAE1P78406 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.53□□□□□ -0.24
RAE1P78406 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.53□□□□□ -0.24
RAE1P78406 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RAE1P78406 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAE1P78406 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAE1P78406 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
RAE1P78406 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.52□□□□□ -0.24
RAE1P78406 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.52□□□□□ -0.24
RAE1P78406 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAE1P78406 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.52□□□□□ -0.24
RAE1P78406 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAE1P78406 AL137784.3-201ENST00000623858 2288 ntBASIC13.52□□□□□ -0.24
RAE1P78406 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.52□□□□□ -0.24
RAE1P78406 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RAE1P78406 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
RAE1P78406 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms