Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.46□□□□□ -0.09
WNT3AP56704 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
WNT3AP56704 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.46□□□□□ -0.09
WNT3AP56704 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
WNT3AP56704 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.46□□□□□ -0.09
WNT3AP56704 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
WNT3AP56704 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.46□□□□□ -0.09
WNT3AP56704 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.46□□□□□ -0.09
WNT3AP56704 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.46□□□□□ -0.09
WNT3AP56704 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
WNT3AP56704 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
WNT3AP56704 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.46□□□□□ -0.09
WNT3AP56704 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.46□□□□□ -0.09
WNT3AP56704 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.46□□□□□ -0.09
WNT3AP56704 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.46□□□□□ -0.09
WNT3AP56704 AL451050.2-201ENST00000606967 682 ntBASIC14.46□□□□□ -0.09
WNT3AP56704 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.46□□□□□ -0.09
WNT3AP56704 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.46□□□□□ -0.09
WNT3AP56704 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
WNT3AP56704 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
WNT3AP56704 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
WNT3AP56704 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.46□□□□□ -0.1
WNT3AP56704 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.1
WNT3AP56704 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
WNT3AP56704 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.46□□□□□ -0.1
WNT3AP56704 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.46□□□□□ -0.1
WNT3AP56704 AC130686.1-201ENST00000622936 2466 ntBASIC14.46□□□□□ -0.1
WNT3AP56704 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
WNT3AP56704 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
WNT3AP56704 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
WNT3AP56704 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.45□□□□□ -0.1
WNT3AP56704 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
WNT3AP56704 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.45□□□□□ -0.1
WNT3AP56704 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
WNT3AP56704 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 AC089987.1-201ENST00000551654 2209 ntBASIC14.45□□□□□ -0.1
WNT3AP56704 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 AC103592.1-201ENST00000394513 664 ntBASIC14.45□□□□□ -0.1
WNT3AP56704 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 HMGA1P1-201ENST00000415560 1062 ntBASIC14.45□□□□□ -0.1
WNT3AP56704 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.45□□□□□ -0.1
WNT3AP56704 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 TSPY25P-201ENST00000429463 745 ntBASIC14.45□□□□□ -0.1
WNT3AP56704 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.45□□□□□ -0.1
WNT3AP56704 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.45□□□□□ -0.1
WNT3AP56704 RCC2P8-201ENST00000502779 1035 ntBASIC14.45□□□□□ -0.1
WNT3AP56704 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.45□□□□□ -0.1
WNT3AP56704 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.45□□□□□ -0.1
WNT3AP56704 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
WNT3AP56704 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
WNT3AP56704 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
WNT3AP56704 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
WNT3AP56704 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
WNT3AP56704 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.44□□□□□ -0.1
WNT3AP56704 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
WNT3AP56704 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
WNT3AP56704 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.44□□□□□ -0.1
WNT3AP56704 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.44□□□□□ -0.1
WNT3AP56704 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms