Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CDK7P50613 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 AC091951.1-201ENST00000512854 2465 ntBASIC15.72■□□□□ 0.11
CDK7P50613 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDK7P50613 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.72■□□□□ 0.11
CDK7P50613 BPIFB5P-201ENST00000457066 1099 ntBASIC15.72■□□□□ 0.11
CDK7P50613 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.72■□□□□ 0.11
CDK7P50613 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.72■□□□□ 0.11
CDK7P50613 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.72■□□□□ 0.11
CDK7P50613 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.72■□□□□ 0.11
CDK7P50613 AC008972.2-201ENST00000606587 494 ntBASIC15.72■□□□□ 0.11
CDK7P50613 AL359091.4-201ENST00000610052 409 ntBASIC15.72■□□□□ 0.11
CDK7P50613 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.72■□□□□ 0.11
CDK7P50613 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDK7P50613 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK7P50613 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.71■□□□□ 0.11
CDK7P50613 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.71■□□□□ 0.11
CDK7P50613 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDK7P50613 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.71■□□□□ 0.11
CDK7P50613 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDK7P50613 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CDK7P50613 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.71■□□□□ 0.11
CDK7P50613 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDK7P50613 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDK7P50613 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 CCT8L1P-201ENST00000465400 1674 ntBASIC15.71■□□□□ 0.11
CDK7P50613 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.71■□□□□ 0.11
CDK7P50613 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 HLA-DPA2-205ENST00000433582 733 ntBASIC15.71■□□□□ 0.11
CDK7P50613 VENTXP4-201ENST00000449029 958 ntBASIC15.71■□□□□ 0.11
CDK7P50613 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
CDK7P50613 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.71■□□□□ 0.11
CDK7P50613 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 AC068831.5-201ENST00000557387 328 ntBASIC15.71■□□□□ 0.11
CDK7P50613 SORD2P-201ENST00000558556 1069 ntBASIC15.71■□□□□ 0.11
CDK7P50613 ABHD17AP9-201ENST00000561925 548 ntBASIC15.71■□□□□ 0.11
CDK7P50613 AL009176.1-201ENST00000607876 650 ntBASIC15.71■□□□□ 0.11
CDK7P50613 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.71■□□□□ 0.11
CDK7P50613 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDK7P50613 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CDK7P50613 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms