Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CES1P1-201ENST00000421606 1704 ntBASIC14.16□□□□□ -0.14
CDH3P22223 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 DPM3-202ENST00000368399 517 ntBASIC14.16□□□□□ -0.14
CDH3P22223 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CDH3P22223 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH3P22223 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.16□□□□□ -0.14
CDH3P22223 RPL18P13-201ENST00000478088 569 ntBASIC14.16□□□□□ -0.14
CDH3P22223 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.16□□□□□ -0.14
CDH3P22223 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.16□□□□□ -0.14
CDH3P22223 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH3P22223 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.16□□□□□ -0.14
CDH3P22223 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 AC005962.1-201ENST00000584100 773 ntBASIC14.16□□□□□ -0.14
CDH3P22223 AC005324.6-201ENST00000587972 613 ntBASIC14.16□□□□□ -0.14
CDH3P22223 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CDH3P22223 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.16□□□□□ -0.14
CDH3P22223 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH3P22223 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.16□□□□□ -0.14
CDH3P22223 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CDH3P22223 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CDH3P22223 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH3P22223 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 AC105206.1-202ENST00000314927 2368 ntBASIC14.15□□□□□ -0.14
CDH3P22223 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDH3P22223 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.15□□□□□ -0.14
CDH3P22223 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH3P22223 KLF2P1-201ENST00000447438 1042 ntBASIC14.15□□□□□ -0.14
CDH3P22223 AC104073.2-201ENST00000453737 312 ntBASIC14.15□□□□□ -0.14
CDH3P22223 BX284668.4-201ENST00000453917 508 ntBASIC14.15□□□□□ -0.14
CDH3P22223 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDH3P22223 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH3P22223 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH3P22223 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH3P22223 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH3P22223 NDUFV2P1-201ENST00000596415 907 ntBASIC14.15□□□□□ -0.14
CDH3P22223 AC090164.2-201ENST00000611487 516 ntBASIC14.15□□□□□ -0.14
CDH3P22223 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH3P22223 AL139099.5-201ENST00000635274 300 ntBASIC14.15□□□□□ -0.14
CDH3P22223 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDH3P22223 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH3P22223 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDH3P22223 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms