Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.37□□□□□ -0.59
IFNA1P01562 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.37□□□□□ -0.59
IFNA1P01562 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 AC079140.1-201ENST00000508039 487 ntBASIC11.37□□□□□ -0.59
IFNA1P01562 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.37□□□□□ -0.59
IFNA1P01562 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 RN7SL828P-201ENST00000607615 303 ntBASIC11.37□□□□□ -0.59
IFNA1P01562 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 AC003101.2-201ENST00000612557 442 ntBASIC11.37□□□□□ -0.59
IFNA1P01562 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 AC004840.1-201ENST00000636359 365 ntBASIC11.37□□□□□ -0.59
IFNA1P01562 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
IFNA1P01562 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.36□□□□□ -0.59
IFNA1P01562 AL928654.5-201ENST00000624831 2501 ntBASIC11.36□□□□□ -0.59
IFNA1P01562 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.36□□□□□ -0.59
IFNA1P01562 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
IFNA1P01562 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 AL353779.1-201ENST00000434793 351 ntBASIC11.36□□□□□ -0.59
IFNA1P01562 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.36□□□□□ -0.59
IFNA1P01562 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.36□□□□□ -0.59
IFNA1P01562 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.36□□□□□ -0.59
IFNA1P01562 AL121912.1-201ENST00000603683 238 ntBASIC11.36□□□□□ -0.59
IFNA1P01562 LINC01115-203ENST00000606068 577 ntBASIC11.36□□□□□ -0.59
IFNA1P01562 Z83851.2-201ENST00000609564 659 ntBASIC11.36□□□□□ -0.59
IFNA1P01562 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 AC004461.2-201ENST00000629517 803 ntBASIC11.36□□□□□ -0.59
IFNA1P01562 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms