Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AP001065.2-201ENST00000617205 644 ntBASIC11.57□□□□□ -0.56
HOXA3O43365 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HOXA3O43365 AL591471.1-201ENST00000621855 229 ntBASIC11.57□□□□□ -0.56
HOXA3O43365 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.57□□□□□ -0.56
HOXA3O43365 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
HOXA3O43365 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
HOXA3O43365 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
HOXA3O43365 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
HOXA3O43365 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
HOXA3O43365 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HOXA3O43365 LINC00528-201ENST00000600723 2160 ntBASIC11.57□□□□□ -0.56
HOXA3O43365 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.57□□□□□ -0.56
HOXA3O43365 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.57□□□□□ -0.56
HOXA3O43365 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HOXA3O43365 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
HOXA3O43365 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC11.56□□□□□ -0.56
HOXA3O43365 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC11.56□□□□□ -0.56
HOXA3O43365 FTH1P22-201ENST00000456305 520 ntBASIC11.56□□□□□ -0.56
HOXA3O43365 NDUFS6P1-201ENST00000485187 316 ntBASIC11.56□□□□□ -0.56
HOXA3O43365 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 AP002353.1-201ENST00000528257 1599 ntBASIC11.56□□□□□ -0.56
HOXA3O43365 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC11.56□□□□□ -0.56
HOXA3O43365 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC11.56□□□□□ -0.56
HOXA3O43365 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC11.56□□□□□ -0.56
HOXA3O43365 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
HOXA3O43365 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HOXA3O43365 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
HOXA3O43365 AC015656.1-201ENST00000624209 3578 ntBASIC11.56□□□□□ -0.56
HOXA3O43365 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HOXA3O43365 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.55□□□□□ -0.56
HOXA3O43365 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HOXA3O43365 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.55□□□□□ -0.56
HOXA3O43365 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HOXA3O43365 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC11.55□□□□□ -0.56
HOXA3O43365 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HOXA3O43365 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC11.55□□□□□ -0.56
HOXA3O43365 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HOXA3O43365 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
HOXA3O43365 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HOXA3O43365 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms