Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCL27Q9Y4X3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCL27Q9Y4X3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCL27Q9Y4X3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCL27Q9Y4X3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 AC079630.1-202ENST00000618127 1840 ntBASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 AL117328.2-201ENST00000624617 1940 ntBASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 AC233723.2-201ENST00000623798 2106 ntBASIC21.68■■□□□ 1.06
CCL27Q9Y4X3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCL27Q9Y4X3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCL27Q9Y4X3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCL27Q9Y4X3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCL27Q9Y4X3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.67■■□□□ 1.06
CCL27Q9Y4X3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCL27Q9Y4X3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCL27Q9Y4X3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 AC103724.3-201ENST00000564481 992 ntBASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCL27Q9Y4X3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCL27Q9Y4X3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCL27Q9Y4X3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 SNX5-217ENST00000606557 1087 ntBASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL27Q9Y4X3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCL27Q9Y4X3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.61■■□□□ 1.05
CCL27Q9Y4X3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.61■■□□□ 1.05
CCL27Q9Y4X3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL27Q9Y4X3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL27Q9Y4X3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCL27Q9Y4X3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCL27Q9Y4X3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CCL27Q9Y4X3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.6■■□□□ 1.05
CCL27Q9Y4X3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCL27Q9Y4X3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCL27Q9Y4X3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.6■■□□□ 1.05
CCL27Q9Y4X3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 KRT8P33-201ENST00000508125 1423 ntBASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 AC137630.3-201ENST00000607245 391 ntBASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms