Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF11Q9Y3C5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF11Q9Y3C5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF11Q9Y3C5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF11Q9Y3C5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF11Q9Y3C5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22■■□□□ 1.11
RNF11Q9Y3C5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22■■□□□ 1.11
RNF11Q9Y3C5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF11Q9Y3C5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF11Q9Y3C5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF11Q9Y3C5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.98■■□□□ 1.11
RNF11Q9Y3C5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
RNF11Q9Y3C5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF11Q9Y3C5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF11Q9Y3C5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF11Q9Y3C5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.98■■□□□ 1.11
RNF11Q9Y3C5 AL117328.2-201ENST00000624617 1940 ntBASIC21.98■■□□□ 1.11
RNF11Q9Y3C5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 AC004448.1-201ENST00000458332 883 ntBASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF11Q9Y3C5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF11Q9Y3C5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RNF11Q9Y3C5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF11Q9Y3C5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF11Q9Y3C5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF11Q9Y3C5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RNF11Q9Y3C5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF11Q9Y3C5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF11Q9Y3C5 AC092068.2-201ENST00000590491 1708 ntBASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF11Q9Y3C5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 AL031848.2-201ENST00000607670 837 ntBASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF11Q9Y3C5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF11Q9Y3C5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF11Q9Y3C5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF11Q9Y3C5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF11Q9Y3C5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF11Q9Y3C5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms