Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 RANBP3-221ENST00000591124 575 ntTSL 417.78■□□□□ 0.442e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-208ENST00000587263 579 ntTSL 517.34■□□□□ 0.372e-6■■■□□ 14.9
DDX52Q9Y2R4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.272e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-213ENST00000587956 512 ntTSL 516.68■□□□□ 0.262e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-229ENST00000592771 1937 ntTSL 1 (best)16.49■□□□□ 0.232e-6■■■□□ 14.9
DDX52Q9Y2R4 CYHR1-208ENST00000528663 5821 ntTSL 1 (best)15.68■□□□□ 0.12e-6■■■□□ 14.9
DDX52Q9Y2R4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.022e-6■■■□□ 14.9
DDX52Q9Y2R4 CYHR1-211ENST00000533173 6158 ntTSL 1 (best)14.66□□□□□ -0.062e-6■■■□□ 14.9
DDX52Q9Y2R4 AGAP1-203ENST00000402604 563 ntTSL 414.51□□□□□ -0.097e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-225ENST00000592133 562 ntTSL 414.21□□□□□ -0.132e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-228ENST00000592621 818 ntTSL 513.92□□□□□ -0.182e-6■■■□□ 14.9
DDX52Q9Y2R4 AFF4-203ENST00000378595 3348 ntTSL 1 (best) BASIC13.08□□□□□ -0.322e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.342e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■■■□□ 14.9
DDX52Q9Y2R4 GAK-204ENST00000504435 4346 ntTSL 212.57□□□□□ -0.42e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-207ENST00000587159 554 ntTSL 512.48□□□□□ -0.412e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-205ENST00000586117 524 ntTSL 412.29□□□□□ -0.442e-6■■■□□ 14.9
DDX52Q9Y2R4 GNB1-202ENST00000434686 684 ntTSL 311.95□□□□□ -0.53e-12■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-219ENST00000590953 571 ntTSL 311.76□□□□□ -0.532e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-216ENST00000589353 490 ntTSL 511.73□□□□□ -0.532e-6■■■□□ 14.9
DDX52Q9Y2R4 SSBP4-208ENST00000600628 550 ntTSL 310.52□□□□□ -0.732e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-218ENST00000590623 786 ntTSL 59.59□□□□□ -0.872e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-204ENST00000585339 566 ntTSL 48.95□□□□□ -0.982e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-214ENST00000588010 568 ntTSL 55.05□□□□□ -1.62e-6■■■□□ 14.9
DDX52Q9Y2R4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.773e-6■■■□□ 14.9
DDX52Q9Y2R4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.33■□□□□ 0.844e-9■■■□□ 14.9
DDX52Q9Y2R4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.294e-9■■■□□ 14.9
DDX52Q9Y2R4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.284e-7■■■□□ 14.7
DDX52Q9Y2R4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.53■■■□□ 2.163e-7■■■□□ 14.6
DDX52Q9Y2R4 SH2B1-209ENST00000563674 719 ntTSL 327.19■■□□□ 1.943e-7■■■□□ 14.6
DDX52Q9Y2R4 SH2B1-212ENST00000567536 484 ntTSL 326.65■■□□□ 1.863e-7■■■□□ 14.6
DDX52Q9Y2R4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.67■□□□□ 0.743e-7■■■□□ 14.6
DDX52Q9Y2R4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.4■□□□□ 0.73e-7■■■□□ 14.6
DDX52Q9Y2R4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.623e-7■■■□□ 14.6
DDX52Q9Y2R4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.74■□□□□ 0.593e-7■■■□□ 14.6
DDX52Q9Y2R4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.91■□□□□ 0.463e-7■■■□□ 14.6
DDX52Q9Y2R4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.365e-6■■■□□ 14.6
DDX52Q9Y2R4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.31■■□□□ 1.325e-6■■■□□ 14.6
DDX52Q9Y2R4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.15■■□□□ 1.145e-6■■■□□ 14.6
DDX52Q9Y2R4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.655e-6■■■□□ 14.6
DDX52Q9Y2R4 MT-TT-201ENST00000387460 66 ntBASIC1.44□□□□□ -2.181e-323■■■□□ 14.6
DDX52Q9Y2R4 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.433e-7■■■□□ 14.6
DDX52Q9Y2R4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.53e-7■■■□□ 14.6
DDX52Q9Y2R4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.582e-8■■□□□ 14.5
DDX52Q9Y2R4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.272e-8■■□□□ 14.5
DDX52Q9Y2R4 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.592e-8■■□□□ 14.5
DDX52Q9Y2R4 ARID1A-216ENST00000637465 699 ntTSL 54.56□□□□□ -1.682e-8■■□□□ 14.5
DDX52Q9Y2R4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.291e-6■■□□□ 14.5
DDX52Q9Y2R4 RBM14-RBM4-202ENST00000421355 2034 ntTSL 221.82■■□□□ 1.081e-6■■□□□ 14.5
DDX52Q9Y2R4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.47■■□□□ 1.031e-6■■□□□ 14.5
DDX52Q9Y2R4 RBM14-RBM4-204ENST00000511114 523 ntTSL 414.67□□□□□ -0.061e-6■■□□□ 14.5
DDX52Q9Y2R4 ASPSCR1-213ENST00000582355 1246 ntTSL 528.1■■■□□ 2.095e-9■■□□□ 14.5
DDX52Q9Y2R4 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)26.58■■□□□ 1.855e-9■■□□□ 14.5
DDX52Q9Y2R4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.15■■□□□ 1.785e-9■■□□□ 14.5
DDX52Q9Y2R4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.715e-9■■□□□ 14.5
DDX52Q9Y2R4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.715e-9■■□□□ 14.5
DDX52Q9Y2R4 ASPSCR1-216ENST00000583503 641 ntTSL 321.25■□□□□ 0.995e-9■■□□□ 14.5
DDX52Q9Y2R4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.877e-7■■□□□ 14.5
DDX52Q9Y2R4 PTTG1IP-206ENST00000480234 398 ntTSL 324.12■■□□□ 1.459e-18■■□□□ 14.5
DDX52Q9Y2R4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.41■■□□□ 1.029e-18■■□□□ 14.5
DDX52Q9Y2R4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.35■■□□□ 1.019e-18■■□□□ 14.5
DDX52Q9Y2R4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.819e-18■■□□□ 14.5
DDX52Q9Y2R4 PTTG1IP-207ENST00000494690 612 ntTSL 514.62□□□□□ -0.079e-18■■□□□ 14.5
DDX52Q9Y2R4 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.131e-6■■□□□ 14.5
DDX52Q9Y2R4 LARP1-211ENST00000521577 817 ntTSL 529.23■■■□□ 2.271e-7■■□□□ 14.4
DDX52Q9Y2R4 SEPT9-229ENST00000590576 583 ntTSL 324.09■■□□□ 1.452e-6■■□□□ 14.4
DDX52Q9Y2R4 SEPT9-222ENST00000589070 582 ntTSL 321.91■■□□□ 1.12e-6■■□□□ 14.4
DDX52Q9Y2R4 CYP4F3-207ENST00000592279 2078 ntTSL 220.92■□□□□ 0.942e-6■■□□□ 14.4
DDX52Q9Y2R4 ANKRD11-210ENST00000566858 580 ntTSL 419.02■□□□□ 0.643e-7■■□□□ 14.4
DDX52Q9Y2R4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.632e-6■■□□□ 14.4
DDX52Q9Y2R4 CYP4F3-204ENST00000587360 559 ntTSL 418.68■□□□□ 0.582e-6■■□□□ 14.4
DDX52Q9Y2R4 ANKRD11-212ENST00000567699 412 ntTSL 517.59■□□□□ 0.411e-7■■□□□ 14.4
DDX52Q9Y2R4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.362e-6■■□□□ 14.4
DDX52Q9Y2R4 SEPT9-217ENST00000587237 548 ntTSL 516.94■□□□□ 0.32e-6■■□□□ 14.4
DDX52Q9Y2R4 SEPT9-240ENST00000591833 576 ntTSL 416.92■□□□□ 0.32e-6■■□□□ 14.4
DDX52Q9Y2R4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.91■□□□□ 0.33e-7■■□□□ 14.4
DDX52Q9Y2R4 ANKRD11-216ENST00000568924 587 ntTSL 416.5■□□□□ 0.233e-7■■□□□ 14.4
DDX52Q9Y2R4 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.192e-6■■□□□ 14.4
DDX52Q9Y2R4 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.232e-6■■□□□ 14.4
DDX52Q9Y2R4 RER1-208ENST00000493207 686 ntTSL 220■□□□□ 0.794e-6■■□□□ 14.4
DDX52Q9Y2R4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.45■□□□□ 0.864e-6■■□□□ 14.4
DDX52Q9Y2R4 FSCN1-204ENST00000447103 713 ntTSL 422.72■■□□□ 1.234e-6■■□□□ 14.4
DDX52Q9Y2R4 FSCN1-202ENST00000405801 550 ntTSL 422.25■■□□□ 1.154e-6■■□□□ 14.4
DDX52Q9Y2R4 FSCN1-203ENST00000444748 580 ntTSL 321.64■■□□□ 1.054e-6■■□□□ 14.4
DDX52Q9Y2R4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.674e-6■■□□□ 14.4
DDX52Q9Y2R4 DAZAP1-206ENST00000587833 560 ntTSL 512.29□□□□□ -0.449e-7■■□□□ 14.4
DDX52Q9Y2R4 NSD2-218ENST00000508355 2092 ntTSL 1 (best)16.47■□□□□ 0.235e-6■■□□□ 14.4
DDX52Q9Y2R4 NSD2-216ENST00000507820 528 ntTSL 515.25■□□□□ 0.035e-6■■□□□ 14.4
DDX52Q9Y2R4 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.895e-6■■□□□ 14.4
DDX52Q9Y2R4 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC9.09□□□□□ -0.955e-6■■□□□ 14.4
DDX52Q9Y2R4 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC14.85□□□□□ -0.031e-323■■□□□ 14.3
DDX52Q9Y2R4 SH3D21-202ENST00000474766 2043 ntTSL 1 (best)23.93■■□□□ 1.421e-6■■□□□ 14.3
DDX52Q9Y2R4 SH3D21-203ENST00000480549 3182 ntTSL 219.42■□□□□ 0.71e-6■■□□□ 14.3
DDX52Q9Y2R4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.873e-6■■□□□ 14.3
DDX52Q9Y2R4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.82□□□□□ -0.042e-6■■□□□ 14.3
DDX52Q9Y2R4 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.23e-6■■□□□ 14.3
DDX52Q9Y2R4 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.753e-6■■□□□ 14.3
DDX52Q9Y2R4 FLNB-210ENST00000481470 6497 ntTSL 1 (best)10.03□□□□□ -0.83e-6■■□□□ 14.3
DDX52Q9Y2R4 AC020978.8-201ENST00000571975 3022 ntBASIC7.96□□□□□ -1.143e-6■■□□□ 14.3
DDX52Q9Y2R4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.232e-6■■□□□ 14.3
Retrieved 100 of 4,483 protein–RNA pairs in 113.2 ms