Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 MIR3181-201ENST00000578512 73 ntBASIC22.68■■□□□ 1.22
NCKAP1Q9Y2A7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.68■■□□□ 1.22
NCKAP1Q9Y2A7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
NCKAP1Q9Y2A7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
NCKAP1Q9Y2A7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.68■■□□□ 1.22
NCKAP1Q9Y2A7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.68■■□□□ 1.22
NCKAP1Q9Y2A7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
NCKAP1Q9Y2A7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
NCKAP1Q9Y2A7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
NCKAP1Q9Y2A7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.67■■□□□ 1.22
NCKAP1Q9Y2A7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.67■■□□□ 1.22
NCKAP1Q9Y2A7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
NCKAP1Q9Y2A7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
NCKAP1Q9Y2A7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NCKAP1Q9Y2A7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NCKAP1Q9Y2A7 AC099791.1-201ENST00000416440 715 ntBASIC22.66■■□□□ 1.22
NCKAP1Q9Y2A7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NCKAP1Q9Y2A7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.66■■□□□ 1.22
NCKAP1Q9Y2A7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NCKAP1Q9Y2A7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 AC141586.4-201ENST00000624558 1573 ntBASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1Q9Y2A7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
NCKAP1Q9Y2A7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NCKAP1Q9Y2A7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NCKAP1Q9Y2A7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 AC233992.3-201ENST00000607491 485 ntBASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 pRNA.6-201ENST00000610482 90 ntBASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 pRNA.5-201ENST00000612139 90 ntBASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 pRNA.11-201ENST00000618423 90 ntBASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 pRNA.13-201ENST00000619112 90 ntBASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
NCKAP1Q9Y2A7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NCKAP1Q9Y2A7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
NCKAP1Q9Y2A7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.63■■□□□ 1.21
NCKAP1Q9Y2A7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NCKAP1Q9Y2A7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NCKAP1Q9Y2A7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 BX842568.3-201ENST00000418104 571 ntBASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 AC026271.2-201ENST00000428091 497 ntBASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 MIR5787-201ENST00000611784 55 ntBASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NCKAP1Q9Y2A7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 IRS3P-201ENST00000223076 1006 ntBASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 AC142381.3-201ENST00000568208 1670 ntBASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NCKAP1Q9Y2A7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NCKAP1Q9Y2A7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.6■■□□□ 1.21
NCKAP1Q9Y2A7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
NCKAP1Q9Y2A7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NCKAP1Q9Y2A7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.6■■□□□ 1.21
NCKAP1Q9Y2A7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.6■■□□□ 1.21
NCKAP1Q9Y2A7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
NCKAP1Q9Y2A7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.6■■□□□ 1.21
NCKAP1Q9Y2A7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.59■■□□□ 1.21
NCKAP1Q9Y2A7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
NCKAP1Q9Y2A7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.58■■□□□ 1.21
NCKAP1Q9Y2A7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NCKAP1Q9Y2A7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NCKAP1Q9Y2A7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.58■■□□□ 1.21
NCKAP1Q9Y2A7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NCKAP1Q9Y2A7 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.58■■□□□ 1.21
NCKAP1Q9Y2A7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms