Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 KRT16P3-201ENST00000439127 1283 ntBASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 MIR6724-1-201ENST00000616420 92 ntBASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 MIR6724-2-201ENST00000616483 92 ntBASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 MIR6724-4-201ENST00000617390 92 ntBASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 MIR6724-3-201ENST00000622482 92 ntBASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN4Q9NRR5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
UBQLN4Q9NRR5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN4Q9NRR5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 AC092068.2-201ENST00000590491 1708 ntBASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN4Q9NRR5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
UBQLN4Q9NRR5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.73■□□□□ 0.91
UBQLN4Q9NRR5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN4Q9NRR5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.73■□□□□ 0.91
UBQLN4Q9NRR5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN4Q9NRR5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.73■□□□□ 0.91
UBQLN4Q9NRR5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.73■□□□□ 0.91
UBQLN4Q9NRR5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN4Q9NRR5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.72■□□□□ 0.91
UBQLN4Q9NRR5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN4Q9NRR5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.7■□□□□ 0.91
UBQLN4Q9NRR5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
UBQLN4Q9NRR5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms