Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF408Q9H9D4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 AC016769.1-201ENST00000409132 1010 ntBASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF408Q9H9D4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.85■■□□□ 1.89
ZNF408Q9H9D4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
ZNF408Q9H9D4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.85■■□□□ 1.89
ZNF408Q9H9D4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.85■■□□□ 1.89
ZNF408Q9H9D4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.85■■□□□ 1.89
ZNF408Q9H9D4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZNF408Q9H9D4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZNF408Q9H9D4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 AL355802.2-201ENST00000402069 882 ntBASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 CDCA4P2-201ENST00000441182 718 ntBASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 AC073111.5-205ENST00000641717 521 ntBASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 AC142086.6-201ENST00000621154 1765 ntBASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.84■■□□□ 1.89
ZNF408Q9H9D4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 AC104771.1-201ENST00000603335 964 ntBASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.83■■□□□ 1.89
ZNF408Q9H9D4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 AC010501.1-201ENST00000606270 1962 ntBASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 AC137761.2-201ENST00000561729 223 ntBASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 AC145350.3-201ENST00000569033 163 ntBASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 RAP2CP1-201ENST00000605103 478 ntBASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
ZNF408Q9H9D4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ZNF408Q9H9D4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.8■■□□□ 1.88
ZNF408Q9H9D4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.8■■□□□ 1.88
ZNF408Q9H9D4 AC006015.1-201ENST00000429970 570 ntBASIC26.79■■□□□ 1.88
ZNF408Q9H9D4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.79■■□□□ 1.88
ZNF408Q9H9D4 TMEM191A-211ENST00000637163 1067 ntBASIC26.79■■□□□ 1.88
ZNF408Q9H9D4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.79■■□□□ 1.88
ZNF408Q9H9D4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZNF408Q9H9D4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZNF408Q9H9D4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.78■■□□□ 1.88
ZNF408Q9H9D4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZNF408Q9H9D4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZNF408Q9H9D4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ZNF408Q9H9D4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZNF408Q9H9D4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZNF408Q9H9D4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZNF408Q9H9D4 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.77■■□□□ 1.88
ZNF408Q9H9D4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.77■■□□□ 1.88
ZNF408Q9H9D4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.77■■□□□ 1.88
ZNF408Q9H9D4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms