Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SH2D4AQ9H788 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.44■■□□□ 1.82
SH2D4AQ9H788 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.44■■□□□ 1.82
SH2D4AQ9H788 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH2D4AQ9H788 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SH2D4AQ9H788 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SH2D4AQ9H788 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH2D4AQ9H788 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH2D4AQ9H788 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH2D4AQ9H788 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SH2D4AQ9H788 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SH2D4AQ9H788 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.42■■□□□ 1.82
SH2D4AQ9H788 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.42■■□□□ 1.82
SH2D4AQ9H788 MIR3181-201ENST00000578512 73 ntBASIC26.42■■□□□ 1.82
SH2D4AQ9H788 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
SH2D4AQ9H788 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SH2D4AQ9H788 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SH2D4AQ9H788 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SH2D4AQ9H788 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 CA15P2-201ENST00000611168 834 ntBASIC26.41■■□□□ 1.82
SH2D4AQ9H788 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SH2D4AQ9H788 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 AC141586.4-201ENST00000624558 1573 ntBASIC26.4■■□□□ 1.82
SH2D4AQ9H788 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.4■■□□□ 1.82
SH2D4AQ9H788 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH2D4AQ9H788 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH2D4AQ9H788 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SH2D4AQ9H788 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.39■■□□□ 1.82
SH2D4AQ9H788 RARRES2P6-201ENST00000567333 442 ntBASIC26.39■■□□□ 1.82
SH2D4AQ9H788 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.39■■□□□ 1.82
SH2D4AQ9H788 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SH2D4AQ9H788 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
SH2D4AQ9H788 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SH2D4AQ9H788 AC008764.7-201ENST00000593779 1081 ntBASIC26.38■■□□□ 1.81
SH2D4AQ9H788 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.38■■□□□ 1.81
SH2D4AQ9H788 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SH2D4AQ9H788 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SH2D4AQ9H788 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH2D4AQ9H788 AC138932.3-201ENST00000567634 1902 ntBASIC26.36■■□□□ 1.81
SH2D4AQ9H788 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SH2D4AQ9H788 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH2D4AQ9H788 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SH2D4AQ9H788 AC099791.1-201ENST00000416440 715 ntBASIC26.36■■□□□ 1.81
SH2D4AQ9H788 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.36■■□□□ 1.81
SH2D4AQ9H788 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH2D4AQ9H788 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH2D4AQ9H788 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SH2D4AQ9H788 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SH2D4AQ9H788 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SH2D4AQ9H788 pRNA.6-201ENST00000610482 90 ntBASIC26.35■■□□□ 1.81
SH2D4AQ9H788 pRNA.5-201ENST00000612139 90 ntBASIC26.35■■□□□ 1.81
SH2D4AQ9H788 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
SH2D4AQ9H788 pRNA.11-201ENST00000618423 90 ntBASIC26.35■■□□□ 1.81
SH2D4AQ9H788 pRNA.13-201ENST00000619112 90 ntBASIC26.35■■□□□ 1.81
SH2D4AQ9H788 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
SH2D4AQ9H788 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 BX842568.3-201ENST00000418104 571 ntBASIC26.34■■□□□ 1.81
SH2D4AQ9H788 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 AC233992.3-201ENST00000607491 485 ntBASIC26.34■■□□□ 1.81
SH2D4AQ9H788 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.34■■□□□ 1.81
SH2D4AQ9H788 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SH2D4AQ9H788 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms