Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42EP4Q9H3Q1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDC42EP4Q9H3Q1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDC42EP4Q9H3Q1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDC42EP4Q9H3Q1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDC42EP4Q9H3Q1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDC42EP4Q9H3Q1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 AC137767.1-201ENST00000602918 1920 ntBASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42EP4Q9H3Q1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDC42EP4Q9H3Q1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42EP4Q9H3Q1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42EP4Q9H3Q1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42EP4Q9H3Q1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.98■■□□□ 1.27
CDC42EP4Q9H3Q1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42EP4Q9H3Q1 MIR4449-201ENST00000578365 66 ntBASIC22.98■■□□□ 1.27
CDC42EP4Q9H3Q1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42EP4Q9H3Q1 AC242852.2-201ENST00000615738 1807 ntBASIC22.98■■□□□ 1.27
CDC42EP4Q9H3Q1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42EP4Q9H3Q1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42EP4Q9H3Q1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 MIR6765-201ENST00000614092 87 ntBASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.96■■□□□ 1.27
CDC42EP4Q9H3Q1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CDC42EP4Q9H3Q1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42EP4Q9H3Q1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 ESRRAP2-201ENST00000418437 1549 ntBASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 LONRF2P2-201ENST00000439212 571 ntBASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 DUX4L9-201ENST00000449051 1259 ntBASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 AC007375.3-201ENST00000600936 2314 ntBASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42EP4Q9H3Q1 AC079630.1-202ENST00000618127 1840 ntBASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms