Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 RNF126P1-201ENST00000567452 1320 ntBASIC23.54■■□□□ 1.36
DDX47Q9H0S4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
DDX47Q9H0S4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX47Q9H0S4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX47Q9H0S4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX47Q9H0S4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX47Q9H0S4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX47Q9H0S4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX47Q9H0S4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX47Q9H0S4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 LONRF2P2-201ENST00000439212 571 ntBASIC23.5■■□□□ 1.35
DDX47Q9H0S4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
DDX47Q9H0S4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX47Q9H0S4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DDX47Q9H0S4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX47Q9H0S4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX47Q9H0S4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX47Q9H0S4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX47Q9H0S4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX47Q9H0S4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX47Q9H0S4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.48■■□□□ 1.35
DDX47Q9H0S4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX47Q9H0S4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.47■■□□□ 1.35
DDX47Q9H0S4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 AC127496.7-201ENST00000625110 1798 ntBASIC23.47■■□□□ 1.35
DDX47Q9H0S4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX47Q9H0S4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.46■■□□□ 1.35
DDX47Q9H0S4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX47Q9H0S4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
DDX47Q9H0S4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
DDX47Q9H0S4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX47Q9H0S4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms