Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZNF559Q9BR84 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZNF559Q9BR84 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZNF559Q9BR84 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF559Q9BR84 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 AC021242.3-201ENST00000607598 1377 ntBASIC20.86■□□□□ 0.93
ZNF559Q9BR84 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 AF131216.4-201ENST00000638924 1588 ntBASIC20.86■□□□□ 0.93
ZNF559Q9BR84 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF559Q9BR84 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 ANOS2P-203ENST00000472227 1816 ntBASIC20.85■□□□□ 0.93
ZNF559Q9BR84 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF559Q9BR84 AC012676.1-201ENST00000574705 1949 ntBASIC20.84■□□□□ 0.93
ZNF559Q9BR84 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 AC092028.1-203ENST00000608262 953 ntBASIC20.84■□□□□ 0.93
ZNF559Q9BR84 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF559Q9BR84 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ZNF559Q9BR84 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF559Q9BR84 AC068473.5-201ENST00000616428 2072 ntBASIC20.83■□□□□ 0.93
ZNF559Q9BR84 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF559Q9BR84 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.83■□□□□ 0.93
ZNF559Q9BR84 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.83■□□□□ 0.93
ZNF559Q9BR84 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF559Q9BR84 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF559Q9BR84 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.83■□□□□ 0.92
ZNF559Q9BR84 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF559Q9BR84 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF559Q9BR84 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ZNF559Q9BR84 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF559Q9BR84 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 AL136116.3-201ENST00000402907 1138 ntBASIC20.82■□□□□ 0.92
ZNF559Q9BR84 AC131281.2-201ENST00000520478 145 ntBASIC20.82■□□□□ 0.92
ZNF559Q9BR84 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF559Q9BR84 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 AC092068.2-201ENST00000590491 1708 ntBASIC20.81■□□□□ 0.92
ZNF559Q9BR84 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF559Q9BR84 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF559Q9BR84 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ZNF559Q9BR84 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF559Q9BR84 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF559Q9BR84 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF559Q9BR84 AC004448.1-201ENST00000458332 883 ntBASIC20.8■□□□□ 0.92
ZNF559Q9BR84 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF559Q9BR84 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms