Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S3Q96PC3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S3Q96PC3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.97■□□□□ 0.31
AP1S3Q96PC3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S3Q96PC3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S3Q96PC3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S3Q96PC3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S3Q96PC3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
AP1S3Q96PC3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
AP1S3Q96PC3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 SLC25A24-204ENST00000569674 2357 ntBASIC16.95■□□□□ 0.3
AP1S3Q96PC3 AC090340.1-201ENST00000620778 4980 ntBASIC16.95■□□□□ 0.3
AP1S3Q96PC3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S3Q96PC3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.94■□□□□ 0.3
AP1S3Q96PC3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S3Q96PC3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S3Q96PC3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S3Q96PC3 ABCB10P4-201ENST00000566803 2184 ntBASIC16.93■□□□□ 0.3
AP1S3Q96PC3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S3Q96PC3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S3Q96PC3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP1S3Q96PC3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 AL157400.5-201ENST00000507624 621 ntBASIC16.92■□□□□ 0.3
AP1S3Q96PC3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 AC025884.2-201ENST00000553429 711 ntBASIC16.92■□□□□ 0.3
AP1S3Q96PC3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP1S3Q96PC3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP1S3Q96PC3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.9■□□□□ 0.3
AP1S3Q96PC3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP1S3Q96PC3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms