Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC58Q96CX6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC58Q96CX6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC58Q96CX6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC58Q96CX6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC58Q96CX6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 AC137767.1-201ENST00000602918 1920 ntBASIC21.49■■□□□ 1.03
LRRC58Q96CX6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 MIR4449-201ENST00000578365 66 ntBASIC21.49■■□□□ 1.03
LRRC58Q96CX6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LRRC58Q96CX6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 AL592293.1-201ENST00000502889 1188 ntBASIC21.48■■□□□ 1.03
LRRC58Q96CX6 AC131274.2-201ENST00000580697 1507 ntBASIC21.48■■□□□ 1.03
LRRC58Q96CX6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC58Q96CX6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRC58Q96CX6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC58Q96CX6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC58Q96CX6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC58Q96CX6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC58Q96CX6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC58Q96CX6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
LRRC58Q96CX6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
LRRC58Q96CX6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.46■■□□□ 1.03
LRRC58Q96CX6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
LRRC58Q96CX6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.45■■□□□ 1.02
LRRC58Q96CX6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 AC242852.2-201ENST00000615738 1807 ntBASIC21.45■■□□□ 1.02
LRRC58Q96CX6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC58Q96CX6 ESRRAP2-201ENST00000418437 1549 ntBASIC21.45■■□□□ 1.02
LRRC58Q96CX6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 MIR6765-201ENST00000614092 87 ntBASIC21.44■■□□□ 1.02
LRRC58Q96CX6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC58Q96CX6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
LRRC58Q96CX6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.42■■□□□ 1.02
LRRC58Q96CX6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC58Q96CX6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC58Q96CX6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC58Q96CX6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC58Q96CX6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.42■■□□□ 1.02
LRRC58Q96CX6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC58Q96CX6 LONRF2P2-201ENST00000439212 571 ntBASIC21.42■■□□□ 1.02
LRRC58Q96CX6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC58Q96CX6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms