Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOBEC3DQ96AK3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOBEC3DQ96AK3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 AC092068.2-201ENST00000590491 1708 ntBASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.53■□□□□ 0.72
APOBEC3DQ96AK3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 GUSBP5-201ENST00000418136 578 ntBASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 UNC93B8-201ENST00000511903 705 ntBASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOBEC3DQ96AK3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.52■□□□□ 0.71
APOBEC3DQ96AK3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
APOBEC3DQ96AK3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOBEC3DQ96AK3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOBEC3DQ96AK3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
APOBEC3DQ96AK3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.5■□□□□ 0.71
APOBEC3DQ96AK3 KRT16P3-201ENST00000439127 1283 ntBASIC19.5■□□□□ 0.71
APOBEC3DQ96AK3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APOBEC3DQ96AK3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.5■□□□□ 0.71
APOBEC3DQ96AK3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 MIR6724-1-201ENST00000616420 92 ntBASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 MIR6724-2-201ENST00000616483 92 ntBASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 MIR6724-4-201ENST00000617390 92 ntBASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 MIR6724-3-201ENST00000622482 92 ntBASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.49■□□□□ 0.71
APOBEC3DQ96AK3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
APOBEC3DQ96AK3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.47■□□□□ 0.71
APOBEC3DQ96AK3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.46■□□□□ 0.71
APOBEC3DQ96AK3 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms