Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM54Q969K7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM54Q969K7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM54Q969K7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM54Q969K7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM54Q969K7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM54Q969K7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEM54Q969K7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM54Q969K7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM54Q969K7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM54Q969K7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM54Q969K7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM54Q969K7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM54Q969K7 MIR6724-1-201ENST00000616420 92 ntBASIC19.95■□□□□ 0.78
TMEM54Q969K7 MIR6724-2-201ENST00000616483 92 ntBASIC19.95■□□□□ 0.78
TMEM54Q969K7 MIR6724-4-201ENST00000617390 92 ntBASIC19.95■□□□□ 0.78
TMEM54Q969K7 MIR6724-3-201ENST00000622482 92 ntBASIC19.95■□□□□ 0.78
TMEM54Q969K7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TMEM54Q969K7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.94■□□□□ 0.78
TMEM54Q969K7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM54Q969K7 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.94■□□□□ 0.78
TMEM54Q969K7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM54Q969K7 KRT16P3-201ENST00000439127 1283 ntBASIC19.94■□□□□ 0.78
TMEM54Q969K7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM54Q969K7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TMEM54Q969K7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM54Q969K7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM54Q969K7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM54Q969K7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM54Q969K7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM54Q969K7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM54Q969K7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM54Q969K7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM54Q969K7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM54Q969K7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM54Q969K7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM54Q969K7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM54Q969K7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM54Q969K7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM54Q969K7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM54Q969K7 AC079630.1-202ENST00000618127 1840 ntBASIC19.92■□□□□ 0.78
TMEM54Q969K7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TMEM54Q969K7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
TMEM54Q969K7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TMEM54Q969K7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM54Q969K7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM54Q969K7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.91■□□□□ 0.78
TMEM54Q969K7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM54Q969K7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.91■□□□□ 0.78
TMEM54Q969K7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM54Q969K7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TMEM54Q969K7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TMEM54Q969K7 DUSP8P3-201ENST00000399571 1760 ntBASIC19.9■□□□□ 0.78
TMEM54Q969K7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM54Q969K7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM54Q969K7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM54Q969K7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM54Q969K7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TMEM54Q969K7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.9■□□□□ 0.78
TMEM54Q969K7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM54Q969K7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM54Q969K7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM54Q969K7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM54Q969K7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM54Q969K7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM54Q969K7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
TMEM54Q969K7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM54Q969K7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM54Q969K7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM54Q969K7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM54Q969K7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM54Q969K7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.89■□□□□ 0.77
TMEM54Q969K7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM54Q969K7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM54Q969K7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM54Q969K7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms