Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF4Q92544 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TM9SF4Q92544 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF4Q92544 SLC6A10P-202ENST00000431994 2058 ntBASIC21.23■□□□□ 0.99
TM9SF4Q92544 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TM9SF4Q92544 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF4Q92544 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TM9SF4Q92544 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TM9SF4Q92544 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF4Q92544 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF4Q92544 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
TM9SF4Q92544 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF4Q92544 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF4Q92544 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.22■□□□□ 0.99
TM9SF4Q92544 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.22■□□□□ 0.99
TM9SF4Q92544 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
TM9SF4Q92544 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF4Q92544 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TM9SF4Q92544 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TM9SF4Q92544 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF4Q92544 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF4Q92544 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF4Q92544 LINC00543-201ENST00000567234 1845 ntBASIC21.22■□□□□ 0.99
TM9SF4Q92544 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.22■□□□□ 0.99
TM9SF4Q92544 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF4Q92544 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF4Q92544 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF4Q92544 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TM9SF4Q92544 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF4Q92544 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF4Q92544 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.21■□□□□ 0.99
TM9SF4Q92544 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TM9SF4Q92544 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TM9SF4Q92544 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TM9SF4Q92544 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TM9SF4Q92544 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.21■□□□□ 0.99
TM9SF4Q92544 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF4Q92544 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TM9SF4Q92544 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.2■□□□□ 0.98
TM9SF4Q92544 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.2■□□□□ 0.98
TM9SF4Q92544 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TM9SF4Q92544 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.2■□□□□ 0.98
TM9SF4Q92544 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.2■□□□□ 0.98
TM9SF4Q92544 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.2■□□□□ 0.98
TM9SF4Q92544 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.2■□□□□ 0.98
TM9SF4Q92544 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF4Q92544 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF4Q92544 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF4Q92544 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.19■□□□□ 0.98
TM9SF4Q92544 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.19■□□□□ 0.98
TM9SF4Q92544 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.19■□□□□ 0.98
TM9SF4Q92544 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TM9SF4Q92544 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.19■□□□□ 0.98
TM9SF4Q92544 AC024257.2-201ENST00000549699 147 ntBASIC21.19■□□□□ 0.98
TM9SF4Q92544 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.19■□□□□ 0.98
TM9SF4Q92544 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TM9SF4Q92544 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TM9SF4Q92544 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF4Q92544 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF4Q92544 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.18■□□□□ 0.98
TM9SF4Q92544 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF4Q92544 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF4Q92544 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.18■□□□□ 0.98
TM9SF4Q92544 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF4Q92544 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF4Q92544 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF4Q92544 ZNRF2P3-201ENST00000424200 374 ntBASIC21.17■□□□□ 0.98
TM9SF4Q92544 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.17■□□□□ 0.98
TM9SF4Q92544 SUDS3P1-201ENST00000505831 966 ntBASIC21.17■□□□□ 0.98
TM9SF4Q92544 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.17■□□□□ 0.98
TM9SF4Q92544 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TM9SF4Q92544 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF4Q92544 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF4Q92544 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF4Q92544 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF4Q92544 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TM9SF4Q92544 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF4Q92544 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF4Q92544 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TM9SF4Q92544 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TM9SF4Q92544 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TM9SF4Q92544 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF4Q92544 SYT6-210ENST00000641643 1587 ntBASIC21.16■□□□□ 0.98
TM9SF4Q92544 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF4Q92544 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF4Q92544 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.16■□□□□ 0.98
TM9SF4Q92544 RARRES2P6-201ENST00000567333 442 ntBASIC21.16■□□□□ 0.98
TM9SF4Q92544 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF4Q92544 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.16■□□□□ 0.98
TM9SF4Q92544 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TM9SF4Q92544 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms