Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 DUX4L16-201ENST00000555130 1264 ntBASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 HES6-206ENST00000409574 738 ntTSL 2 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 TK2-213ENST00000563369 882 ntTSL 5 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 LBH-205ENST00000407930 756 ntTSL 2 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC9.45□□□□□ -0.9
SYNE2Q8WXH0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 AC142381.4-202ENST00000563973 229 ntBASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 C2orf69P4-201ENST00000565394 541 ntBASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC9.44□□□□□ -0.9
SYNE2Q8WXH0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 AC092171.4-201ENST00000609130 632 ntBASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 AL121832.2-201ENST00000610979 668 ntBASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 AL135925.1-201ENST00000605920 1701 ntBASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 AC133561.5-201ENST00000635547 218 ntBASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 AC009102.2-201ENST00000606772 1639 ntBASIC9.43□□□□□ -0.9
SYNE2Q8WXH0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 MIR572-201ENST00000384983 95 ntBASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 RN7SL850P-201ENST00000579959 291 ntBASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 MIR3181-201ENST00000578512 73 ntBASIC9.42□□□□□ -0.9
SYNE2Q8WXH0 SLC29A4P1-201ENST00000398760 971 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms