Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.45■■□□□ 1.34
CCHCR1Q8TD31 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCHCR1Q8TD31 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CCHCR1Q8TD31 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 AL117328.2-201ENST00000624617 1940 ntBASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCHCR1Q8TD31 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCHCR1Q8TD31 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
CCHCR1Q8TD31 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCHCR1Q8TD31 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.4■■□□□ 1.34
CCHCR1Q8TD31 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCHCR1Q8TD31 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
CCHCR1Q8TD31 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CCHCR1Q8TD31 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCHCR1Q8TD31 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CCHCR1Q8TD31 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCHCR1Q8TD31 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCHCR1Q8TD31 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCHCR1Q8TD31 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCHCR1Q8TD31 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 ALDH1A3-203ENST00000557963 1670 ntBASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 AC233723.2-201ENST00000623798 2106 ntBASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCHCR1Q8TD31 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
CCHCR1Q8TD31 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCHCR1Q8TD31 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCHCR1Q8TD31 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms