Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HMGCLL1Q8TB92 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
HMGCLL1Q8TB92 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HMGCLL1Q8TB92 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.21■■□□□ 1.15
HMGCLL1Q8TB92 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
HMGCLL1Q8TB92 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HMGCLL1Q8TB92 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
HMGCLL1Q8TB92 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGCLL1Q8TB92 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 UNC93B8-201ENST00000511903 705 ntBASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLL1Q8TB92 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.18■■□□□ 1.14
HMGCLL1Q8TB92 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCLL1Q8TB92 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 MTDHP2-201ENST00000601468 714 ntBASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 AC010997.5-201ENST00000609182 354 ntBASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLL1Q8TB92 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.15■■□□□ 1.14
HMGCLL1Q8TB92 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCLL1Q8TB92 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.15■■□□□ 1.14
HMGCLL1Q8TB92 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCLL1Q8TB92 TSPY9P-201ENST00000440215 945 ntBASIC22.15■■□□□ 1.14
HMGCLL1Q8TB92 TSPY11P-201ENST00000442607 1045 ntBASIC22.15■■□□□ 1.14
HMGCLL1Q8TB92 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.15■■□□□ 1.14
HMGCLL1Q8TB92 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HMGCLL1Q8TB92 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HMGCLL1Q8TB92 CLDN5-201ENST00000403084 2357 ntBASIC22.14■■□□□ 1.14
HMGCLL1Q8TB92 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HMGCLL1Q8TB92 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
HMGCLL1Q8TB92 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.14■■□□□ 1.13
HMGCLL1Q8TB92 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms