Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 AL136162.1-201ENST00000607711 1078 ntBASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 AL355001.2-201ENST00000620617 1191 ntBASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
NKX2-3Q8TAU0 AL161729.1-201ENST00000604104 1402 ntBASIC26.89■■□□□ 1.89
NKX2-3Q8TAU0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NKX2-3Q8TAU0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NKX2-3Q8TAU0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
NKX2-3Q8TAU0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.87■■□□□ 1.89
NKX2-3Q8TAU0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NKX2-3Q8TAU0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.87■■□□□ 1.89
NKX2-3Q8TAU0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NKX2-3Q8TAU0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
NKX2-3Q8TAU0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 MIR6821-201ENST00000617625 74 ntBASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NKX2-3Q8TAU0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.85■■□□□ 1.89
NKX2-3Q8TAU0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
NKX2-3Q8TAU0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 AC105265.2-201ENST00000467189 838 ntBASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NKX2-3Q8TAU0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.83■■□□□ 1.88
NKX2-3Q8TAU0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.82■■□□□ 1.88
NKX2-3Q8TAU0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NKX2-3Q8TAU0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
NKX2-3Q8TAU0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.82■■□□□ 1.88
NKX2-3Q8TAU0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.82■■□□□ 1.88
NKX2-3Q8TAU0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.82■■□□□ 1.88
NKX2-3Q8TAU0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NKX2-3Q8TAU0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NKX2-3Q8TAU0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms