Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC168Q8NDH2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC168Q8NDH2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC168Q8NDH2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC168Q8NDH2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC168Q8NDH2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC168Q8NDH2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC168Q8NDH2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC168Q8NDH2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 AC009086.3-201ENST00000623486 1008 ntBASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC168Q8NDH2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 BID-214ENST00000617586 542 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC168Q8NDH2 AC004854.2-201ENST00000608450 1441 ntBASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 pRNA.6-201ENST00000610482 90 ntBASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 pRNA.5-201ENST00000612139 90 ntBASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 pRNA.11-201ENST00000618423 90 ntBASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 pRNA.13-201ENST00000619112 90 ntBASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 AC096887.2-201ENST00000623443 1957 ntBASIC19.11■□□□□ 0.65
CCDC168Q8NDH2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC168Q8NDH2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC168Q8NDH2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC168Q8NDH2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.08■□□□□ 0.65
CCDC168Q8NDH2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC168Q8NDH2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC168Q8NDH2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC168Q8NDH2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC168Q8NDH2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 LINC02228-203ENST00000641970 1355 ntBASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.07■□□□□ 0.64
CCDC168Q8NDH2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms