Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CROCCP3Q8IVE0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 ANOS2P-203ENST00000472227 1816 ntBASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CROCCP3Q8IVE0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CROCCP3Q8IVE0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CROCCP3Q8IVE0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CROCCP3Q8IVE0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CROCCP3Q8IVE0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CROCCP3Q8IVE0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CROCCP3Q8IVE0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CROCCP3Q8IVE0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CROCCP3Q8IVE0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CROCCP3Q8IVE0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CROCCP3Q8IVE0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CROCCP3Q8IVE0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CROCCP3Q8IVE0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CROCCP3Q8IVE0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CROCCP3Q8IVE0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CROCCP3Q8IVE0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CROCCP3Q8IVE0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CROCCP3Q8IVE0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CROCCP3Q8IVE0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 AC007952.6-201ENST00000573168 2673 ntBASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 AC003957.1-201ENST00000625108 2673 ntBASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.38■□□□□ 0.85
CROCCP3Q8IVE0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 AC087741.3-201ENST00000624270 1347 ntBASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 AC092068.2-201ENST00000590491 1708 ntBASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 AC044849.2-201ENST00000606596 710 ntBASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CROCCP3Q8IVE0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 FBXW4P1-201ENST00000426721 2239 ntBASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CROCCP3Q8IVE0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 AC021231.2-201ENST00000594613 730 ntBASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms