Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC245100.8-202ENST00000629247 1058 ntBASIC25.3■■□□□ 1.64
TRIM50Q86XT4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM50Q86XT4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM50Q86XT4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM50Q86XT4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM50Q86XT4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM50Q86XT4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRIM50Q86XT4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.29■■□□□ 1.64
TRIM50Q86XT4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM50Q86XT4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM50Q86XT4 AC091305.1-201ENST00000479476 895 ntBASIC25.28■■□□□ 1.64
TRIM50Q86XT4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.28■■□□□ 1.64
TRIM50Q86XT4 MIR3181-201ENST00000578512 73 ntBASIC25.28■■□□□ 1.64
TRIM50Q86XT4 AL138724.1-201ENST00000606771 1088 ntBASIC25.28■■□□□ 1.64
TRIM50Q86XT4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM50Q86XT4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM50Q86XT4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM50Q86XT4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM50Q86XT4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 RARRES2P6-201ENST00000567333 442 ntBASIC25.27■■□□□ 1.64
TRIM50Q86XT4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM50Q86XT4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 AC008764.7-201ENST00000593779 1081 ntBASIC25.26■■□□□ 1.63
TRIM50Q86XT4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
TRIM50Q86XT4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
TRIM50Q86XT4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.25■■□□□ 1.63
TRIM50Q86XT4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.25■■□□□ 1.63
TRIM50Q86XT4 CA15P2-201ENST00000611168 834 ntBASIC25.25■■□□□ 1.63
TRIM50Q86XT4 AC136469.2-201ENST00000623944 1028 ntBASIC25.25■■□□□ 1.63
TRIM50Q86XT4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM50Q86XT4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
TRIM50Q86XT4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM50Q86XT4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM50Q86XT4 AC027682.1-201ENST00000562846 899 ntBASIC25.23■■□□□ 1.63
TRIM50Q86XT4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.23■■□□□ 1.63
TRIM50Q86XT4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM50Q86XT4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.23■■□□□ 1.63
TRIM50Q86XT4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM50Q86XT4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM50Q86XT4 AC026271.2-201ENST00000428091 497 ntBASIC25.22■■□□□ 1.63
TRIM50Q86XT4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM50Q86XT4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.22■■□□□ 1.63
TRIM50Q86XT4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM50Q86XT4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.22■■□□□ 1.63
TRIM50Q86XT4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.22■■□□□ 1.63
TRIM50Q86XT4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM50Q86XT4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM50Q86XT4 RASA4CP-201ENST00000424092 1398 ntBASIC25.21■■□□□ 1.63
TRIM50Q86XT4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.21■■□□□ 1.63
TRIM50Q86XT4 AC099791.1-201ENST00000416440 715 ntBASIC25.21■■□□□ 1.63
TRIM50Q86XT4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.21■■□□□ 1.63
TRIM50Q86XT4 pRNA.6-201ENST00000610482 90 ntBASIC25.21■■□□□ 1.63
TRIM50Q86XT4 pRNA.5-201ENST00000612139 90 ntBASIC25.21■■□□□ 1.63
TRIM50Q86XT4 pRNA.11-201ENST00000618423 90 ntBASIC25.21■■□□□ 1.63
TRIM50Q86XT4 pRNA.13-201ENST00000619112 90 ntBASIC25.21■■□□□ 1.63
TRIM50Q86XT4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM50Q86XT4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM50Q86XT4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
TRIM50Q86XT4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.2■■□□□ 1.62
TRIM50Q86XT4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.2■■□□□ 1.62
TRIM50Q86XT4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
TRIM50Q86XT4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
TRIM50Q86XT4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM50Q86XT4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
TRIM50Q86XT4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM50Q86XT4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM50Q86XT4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM50Q86XT4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.19■■□□□ 1.62
TRIM50Q86XT4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.19■■□□□ 1.62
TRIM50Q86XT4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.19■■□□□ 1.62
TRIM50Q86XT4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms