Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RAI1Q7Z5J4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RAI1Q7Z5J4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.43■□□□□ 0.7
RAI1Q7Z5J4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RAI1Q7Z5J4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RAI1Q7Z5J4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.43■□□□□ 0.7
RAI1Q7Z5J4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI1Q7Z5J4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAI1Q7Z5J4 IRS3P-201ENST00000223076 1006 ntBASIC19.42■□□□□ 0.7
RAI1Q7Z5J4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.42■□□□□ 0.7
RAI1Q7Z5J4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.42■□□□□ 0.7
RAI1Q7Z5J4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.42■□□□□ 0.7
RAI1Q7Z5J4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI1Q7Z5J4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI1Q7Z5J4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 SLC47A1P1-202ENST00000449666 945 ntBASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAI1Q7Z5J4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 AC034268.1-201ENST00000441047 882 ntBASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI1Q7Z5J4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.39■□□□□ 0.7
RAI1Q7Z5J4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAI1Q7Z5J4 BX842568.3-201ENST00000418104 571 ntBASIC19.39■□□□□ 0.7
RAI1Q7Z5J4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.39■□□□□ 0.7
RAI1Q7Z5J4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAI1Q7Z5J4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.38■□□□□ 0.69
RAI1Q7Z5J4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 AC233992.3-201ENST00000607491 485 ntBASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAI1Q7Z5J4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.36■□□□□ 0.69
RAI1Q7Z5J4 AC009086.3-201ENST00000623486 1008 ntBASIC19.36■□□□□ 0.69
RAI1Q7Z5J4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAI1Q7Z5J4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAI1Q7Z5J4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAI1Q7Z5J4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAI1Q7Z5J4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAI1Q7Z5J4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.36■□□□□ 0.69
RAI1Q7Z5J4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 AC027612.3-201ENST00000413684 1047 ntBASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAI1Q7Z5J4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms