Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF111Q6ZNA4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RNF111Q6ZNA4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF111Q6ZNA4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF111Q6ZNA4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RNF111Q6ZNA4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF111Q6ZNA4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF111Q6ZNA4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF111Q6ZNA4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF111Q6ZNA4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF111Q6ZNA4 GUSBP5-202ENST00000510805 1989 ntBASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 RARRES2P1-201ENST00000474487 481 ntBASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF111Q6ZNA4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF111Q6ZNA4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF111Q6ZNA4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF111Q6ZNA4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 AC127496.7-201ENST00000625110 1798 ntBASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF111Q6ZNA4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
RNF111Q6ZNA4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.84■■□□□ 1.09
RNF111Q6ZNA4 AC103724.3-201ENST00000564481 992 ntBASIC21.84■■□□□ 1.09
RNF111Q6ZNA4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
RNF111Q6ZNA4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RNF111Q6ZNA4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF111Q6ZNA4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.84■■□□□ 1.09
RNF111Q6ZNA4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF111Q6ZNA4 ECEL1P1-201ENST00000373592 1742 ntBASIC21.83■■□□□ 1.09
RNF111Q6ZNA4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF111Q6ZNA4 ANOS2P-203ENST00000472227 1816 ntBASIC21.83■■□□□ 1.09
RNF111Q6ZNA4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
RNF111Q6ZNA4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF111Q6ZNA4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF111Q6ZNA4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF111Q6ZNA4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF111Q6ZNA4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
RNF111Q6ZNA4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF111Q6ZNA4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 AL137060.1-201ENST00000618151 2648 ntBASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 THA1P-201ENST00000590384 1145 ntBASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 AC011551.1-201ENST00000614101 683 ntBASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF111Q6ZNA4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF111Q6ZNA4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF111Q6ZNA4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF111Q6ZNA4 KRT18P24-201ENST00000344739 1156 ntBASIC21.81■■□□□ 1.08
RNF111Q6ZNA4 AC120024.1-201ENST00000562672 995 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms