Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NHLRC1Q6VVB1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 AC239859.2-201ENST00000444165 318 ntBASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NHLRC1Q6VVB1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 MIR4787-201ENST00000607364 84 ntBASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NHLRC1Q6VVB1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NHLRC1Q6VVB1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
NHLRC1Q6VVB1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NHLRC1Q6VVB1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.22■□□□□ 0.83
NHLRC1Q6VVB1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NHLRC1Q6VVB1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.22■□□□□ 0.83
NHLRC1Q6VVB1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.22■□□□□ 0.83
NHLRC1Q6VVB1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 ANOS2P-203ENST00000472227 1816 ntBASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NHLRC1Q6VVB1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NHLRC1Q6VVB1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 KRT125P-201ENST00000546827 989 ntBASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.2■□□□□ 0.82
NHLRC1Q6VVB1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 AL035685.1-201ENST00000636663 812 ntBASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.19■□□□□ 0.82
NHLRC1Q6VVB1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 AC092068.2-201ENST00000590491 1708 ntBASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NHLRC1Q6VVB1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NHLRC1Q6VVB1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NHLRC1Q6VVB1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NHLRC1Q6VVB1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms