Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 MIR939-201ENST00000401314 82 ntBASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 AC006455.2-201ENST00000429931 906 ntBASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 AF213884.3-201ENST00000563833 479 ntBASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 AC009086.3-201ENST00000623486 1008 ntBASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
DCLRE1AQ6PJP8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
DCLRE1AQ6PJP8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.24■■□□□ 1.47
DCLRE1AQ6PJP8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.24■■□□□ 1.47
DCLRE1AQ6PJP8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DCLRE1AQ6PJP8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.24■■□□□ 1.47
DCLRE1AQ6PJP8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.24■■□□□ 1.47
DCLRE1AQ6PJP8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DCLRE1AQ6PJP8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
DCLRE1AQ6PJP8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
DCLRE1AQ6PJP8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
DCLRE1AQ6PJP8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DCLRE1AQ6PJP8 AP001330.3-201ENST00000520123 633 ntBASIC24.23■■□□□ 1.47
DCLRE1AQ6PJP8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.23■■□□□ 1.47
DCLRE1AQ6PJP8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DCLRE1AQ6PJP8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
DCLRE1AQ6PJP8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 MIR3181-201ENST00000578512 73 ntBASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCLRE1AQ6PJP8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 AC026271.2-201ENST00000428091 497 ntBASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 AC136469.2-201ENST00000623944 1028 ntBASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DCLRE1AQ6PJP8 AC141586.4-201ENST00000624558 1573 ntBASIC24.2■■□□□ 1.47
DCLRE1AQ6PJP8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.47
DCLRE1AQ6PJP8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 AC091305.1-201ENST00000479476 895 ntBASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DCLRE1AQ6PJP8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.19■■□□□ 1.46
DCLRE1AQ6PJP8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.19■■□□□ 1.46
DCLRE1AQ6PJP8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
DCLRE1AQ6PJP8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DCLRE1AQ6PJP8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
DCLRE1AQ6PJP8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DCLRE1AQ6PJP8 RASA4CP-201ENST00000424092 1398 ntBASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DCLRE1AQ6PJP8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 AC105265.2-201ENST00000467189 838 ntBASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 AC104564.3-201ENST00000582367 638 ntBASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 pRNA.6-201ENST00000610482 90 ntBASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 MIR5787-201ENST00000611784 55 ntBASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 pRNA.5-201ENST00000612139 90 ntBASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 pRNA.11-201ENST00000618423 90 ntBASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 pRNA.13-201ENST00000619112 90 ntBASIC24.16■■□□□ 1.46
DCLRE1AQ6PJP8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms