Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.9■□□□□ 0.94
H3F3CQ6NXT2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.89■□□□□ 0.94
H3F3CQ6NXT2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
H3F3CQ6NXT2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
H3F3CQ6NXT2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
H3F3CQ6NXT2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
H3F3CQ6NXT2 AC011298.3-201ENST00000615796 283 ntBASIC20.89■□□□□ 0.93
H3F3CQ6NXT2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
H3F3CQ6NXT2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H3F3CQ6NXT2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.88■□□□□ 0.93
H3F3CQ6NXT2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 AL136967.2-201ENST00000623968 743 ntBASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.87■□□□□ 0.93
H3F3CQ6NXT2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 MIR935-201ENST00000401179 91 ntBASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H3F3CQ6NXT2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 MIR4767-201ENST00000582827 78 ntBASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.85■□□□□ 0.93
H3F3CQ6NXT2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 MIR939-201ENST00000401314 82 ntBASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H3F3CQ6NXT2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
H3F3CQ6NXT2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3F3CQ6NXT2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3F3CQ6NXT2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
H3F3CQ6NXT2 AC006455.2-201ENST00000429931 906 ntBASIC20.83■□□□□ 0.93
H3F3CQ6NXT2 AC009086.3-201ENST00000623486 1008 ntBASIC20.83■□□□□ 0.93
H3F3CQ6NXT2 AC141586.4-201ENST00000624558 1573 ntBASIC20.83■□□□□ 0.92
H3F3CQ6NXT2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
H3F3CQ6NXT2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.83■□□□□ 0.92
H3F3CQ6NXT2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 AP001330.3-201ENST00000520123 633 ntBASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 MIR3181-201ENST00000578512 73 ntBASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 AC136469.2-201ENST00000623944 1028 ntBASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H3F3CQ6NXT2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms