Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PPP4R3AQ6IN85 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.67■■□□□ 1.7
PPP4R3AQ6IN85 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.67■■□□□ 1.7
PPP4R3AQ6IN85 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PPP4R3AQ6IN85 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PPP4R3AQ6IN85 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
PPP4R3AQ6IN85 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PPP4R3AQ6IN85 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PPP4R3AQ6IN85 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
PPP4R3AQ6IN85 AC009102.2-201ENST00000606772 1639 ntBASIC25.64■■□□□ 1.7
PPP4R3AQ6IN85 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PPP4R3AQ6IN85 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.64■■□□□ 1.7
PPP4R3AQ6IN85 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
PPP4R3AQ6IN85 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PPP4R3AQ6IN85 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 AL512631.2-201ENST00000604634 923 ntBASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 AC131212.1-201ENST00000613771 668 ntBASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PPP4R3AQ6IN85 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PPP4R3AQ6IN85 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.6■■□□□ 1.69
PPP4R3AQ6IN85 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PPP4R3AQ6IN85 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
PPP4R3AQ6IN85 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PPP4R3AQ6IN85 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PPP4R3AQ6IN85 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PPP4R3AQ6IN85 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.58■■□□□ 1.69
PPP4R3AQ6IN85 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R3AQ6IN85 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PPP4R3AQ6IN85 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R3AQ6IN85 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R3AQ6IN85 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R3AQ6IN85 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R3AQ6IN85 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PPP4R3AQ6IN85 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PPP4R3AQ6IN85 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
PPP4R3AQ6IN85 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PPP4R3AQ6IN85 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PPP4R3AQ6IN85 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PPP4R3AQ6IN85 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PPP4R3AQ6IN85 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.57■■□□□ 1.68
PPP4R3AQ6IN85 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
PPP4R3AQ6IN85 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms