Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF213Q63HN8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RNF213Q63HN8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RNF213Q63HN8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF213Q63HN8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RNF213Q63HN8 AC073912.3-201ENST00000624414 853 ntBASIC12.35□□□□□ -0.43
RNF213Q63HN8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.35□□□□□ -0.43
RNF213Q63HN8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RNF213Q63HN8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RNF213Q63HN8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF213Q63HN8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.35□□□□□ -0.43
RNF213Q63HN8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RNF213Q63HN8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RNF213Q63HN8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF213Q63HN8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF213Q63HN8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 IGHV3-19-201ENST00000521488 291 ntBASIC12.34□□□□□ -0.43
RNF213Q63HN8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RNF213Q63HN8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RNF213Q63HN8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RNF213Q63HN8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RNF213Q63HN8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RNF213Q63HN8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 AL158047.1-201ENST00000445918 881 ntBASIC12.34□□□□□ -0.43
RNF213Q63HN8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.34□□□□□ -0.43
RNF213Q63HN8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
RNF213Q63HN8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RNF213Q63HN8 SLC29A4P1-201ENST00000398760 971 ntBASIC12.33□□□□□ -0.44
RNF213Q63HN8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.33□□□□□ -0.44
RNF213Q63HN8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RNF213Q63HN8 AC131274.2-201ENST00000580697 1507 ntBASIC12.33□□□□□ -0.44
RNF213Q63HN8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RNF213Q63HN8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RNF213Q63HN8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.33□□□□□ -0.44
RNF213Q63HN8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RNF213Q63HN8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.33□□□□□ -0.44
RNF213Q63HN8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC12.33□□□□□ -0.44
RNF213Q63HN8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC12.33□□□□□ -0.44
RNF213Q63HN8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.32□□□□□ -0.44
RNF213Q63HN8 AC004854.2-201ENST00000608450 1441 ntBASIC12.32□□□□□ -0.44
RNF213Q63HN8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 UNC93B4-201ENST00000505679 747 ntBASIC12.32□□□□□ -0.44
RNF213Q63HN8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 FOXO3B-201ENST00000395675 1928 ntBASIC12.32□□□□□ -0.44
RNF213Q63HN8 MIR572-201ENST00000384983 95 ntBASIC12.32□□□□□ -0.44
RNF213Q63HN8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF213Q63HN8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
RNF213Q63HN8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF213Q63HN8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF213Q63HN8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RNF213Q63HN8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF213Q63HN8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF213Q63HN8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF213Q63HN8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF213Q63HN8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF213Q63HN8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF213Q63HN8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF213Q63HN8 SLC7A5P1-201ENST00000568957 537 ntBASIC12.31□□□□□ -0.44
RNF213Q63HN8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF213Q63HN8 LINC01023-201ENST00000606054 436 ntBASIC12.31□□□□□ -0.44
RNF213Q63HN8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF213Q63HN8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF213Q63HN8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms